Rolling stones gather no moss …

Back in early July I mused on how rivers changed over time (see “Where’s the Wear’s weir?”) and reflected on how this shapes our expectations about the plants and animals that we find.  In that post, I compared a view of the River Tees today with the same view as captured by J.R.W Turner at the end of the 18th century.   The photograph above is taken about 40 kilometres further upstream from Egglestone Abbey and shows the River Tees as it tumbles along in a narrow valley between Falcon Clints and Cronkley Scar.   I’ve written about this stretch of river before (see “The intricate ecology of green slime” and “More from Upper Teesdale”) and it is an idyllic stretch.   It all looks, to the uninitiated, very natural, almost untouched by the hand of man.

However, a couple of kilometres beyond this point we turn a corner and are confronted by a high waterfall, Cauldron Snout, formed where the river cascades over the hard Whin Sill.   Scrambling up the blocky dolerite is not difficult so long as you have a head for heights but, on reaching the top, a wall of concrete comes into view.  This is the dam of Cow Green Reservoir, constructed between 1967 and 1971 and highly controversial at the time.  The purpose of the reservoir was to regulate the flow in the River Tees, in particular ensuring that there was sufficient flow in the summer to ensure a steady supply for the industries of Teeside (most of which have, subsequently, closed).  My first visit to Cauldron Snout was in the early 1980s on a Northern Naturalist Union field excursion led by David Bellamy.  As we scrambled down Cauldron Snout, Tom Dunn, an elderly stalwart of the NNU, told me how much more impressive Cauldron Snout had been before the dam was closed.

Now look back at the picture at the top of this post.   The dark patches on the tops of the boulders emerging from the water are growths of the moss Schistidium rivulare, which thrives on the tops of stable boulders that are occasionally submerged.    The old adage “a rolling stone gathers no moss” is, actually, true, leaving me wondering how much less of this moss an walker beside this river in the mid-1960s might have seen.   How many more powerful surges of storm-fuelled water would have there been to overturn the larger boulders on which Schistidium rivulare depends?   Bear in mind, too, that two major tributaries, the Rivers Balder and Lune, also have flow regimes modified by reservoirs and the potential for subtle alteration of the view that Turner saw at Egglestone increases.   I wrote recently about how differences in hydrological regime can affect the types and quantities of algae that are found (see “A tale of two diatoms …”).   I may have stood at exactly the same place where Turner had sat when he drew the scene at Egglestone, but I was looking at a very different river.

The dam of Cow Green Reservoir looming above the top of Cauldron Snout in Upper Teesdale National Nature Reserve, Co. Durham, July 2017.  The picture at the top of this post shows the Tees a couple of kilometres downstream from Cauldron Snout.

Trevor Crisp from the Freshwater Biological Association showed that the consequences of Cow Green Reservoir on the River Tees extend beyond alterations to the flow.  Impounding a huge quantity of water in one of the coolest parts of the country also affects the temperature of the river, due to water’s high specific heat capacity.  This means that there is not just a narrower range of flows, but also a narrower range of temperature recorded.   The difference between coolest and warmest temperatures in the Tees below Cow Green dropped by 1 – 2 °C, which may not seem a lot, but one consequence is to delay the warming of the river water in Spring by about a month, which delays the development of young trout.  However, Crisp and colleagues went on to show that any reduction in growth rate due to lower temperatures was actually offset by other side-effects of the dam (such as a less harsh flow regime) to result in an increase in the total density of fish downstream.   Others have shown significant shifts in the types of invertebrate that he found in the Tees below Cow Green, with a decrease in taxa that are adapted to a harsh hydrological regime, as might be expected.   Maize Beck, a tributary which joins just below Cauldron Snout, and which has a natural flow regime, shows many fewer changes.

One conclusion that we can draw from all this is that healthy ecosystems such as the upper Tees are fairly resilient and can generally adapt to a certain amount of change, as Trevor Crisp’s work on the fish shows us. The big caveat on this is that the upper Tees is relatively unusual in having no natural salmon populations, as the waterfall at High Force presents a natural obstacle to migration.  Had this not been present, then all potential spawning grounds upstream of the reservoir would have been lost.   A second caveat is that there is still a lot that we do not know.   The studies of the river that followed the closure of the dam focussed on lists of the animal and plant species found; a modern ecologist might have put more effort into understanding the consequences for ecological processes, the “verbs” in ecosystems, rather than in the “nouns”.  Who knows how different energy pathways are now, compared to the days before regulation, and what the long-term consequences of such changes might be?  Schistidium rivulare is a good example of the limitations of our knowledge: its presence offers insights into the hydrology of the river, but we know relatively little about the roles that these semi-aquatic mosses play in the river ecosystem.   Knowing that there is much that we do not know should, at least, keep us humble as we struggle to find the balance between preserving natural landscapes and their sustainable use in the future.

Note

Twenty years ago, I would have recognised Schistidium rivulare, if not in the field, then at least after a quick check under the microscope.  Now, however, my moss identification skills are rusty and I had to turn to Pauline Lang to get this moss named.   I mentioned in “The Stresses of Summertime …” how the ecologist’s niche becomes the office not the field.  One danger is that we remain familiar with names (as I am with S. rivulare and other aquatic mosses) but, through lack of practice, lose the craft that connects those names to the living organisms.

References

Armitage, P.D. (2006).   Long-term faunal changes in a regulated and an unregulated stream – Cow Green thirty years on.  River Research and Applications 22: 957-966.

Crisp, D.T. (1973).  Some physical and chemical effects of the Cow Green (upper Teesdale) impoundment.  Freshwater Biology 7: 109-120.

Crisp, D.T., Mann, R.H.K. & Cubby, P.R. (1983).  Effects of regulation on the River Tees upon fish populations below Cow Green Reservoir.  Journal of Applied Ecology 20: 371-386.

Lang, P.D. & Murphy, K.J. (2012).  Environmental drivers, life strategies and bioindicator capacity of bryophyte communities in high-latitude headwater streams.  Hydrobiologia 612: 1-17.

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A hidden world in a salty puddle …

An exchange of emails amongst a group of us preparing an obituary for Hilary Belcher led me to a short paper written by herself and Erica Swale on diatoms from a salty puddle close to a bridge under the M11 motorway in Cambridgeshire.  They had noticed some brown patches that looked like diatoms on the bottom of this puddle in 1979 and took a sample home to examine under the microscope. What they saw was an assemblage of diatoms that was more suggestive of a brackish habitat than freshwaters, leading them to conclude that the road salt that was spread on the M11 in winter was draining off the road and creating these mini salt lakes.  These were not one-off observations: they returned several times to find similar assemblages of diatoms in the same puddles.   Of these, only Surirella brebissonii is common in freshwaters.  Entomoneis and Cylindrotheca are two genera that I have written about before, both from marine or brackish habitats (see “A typical Geordie alga …” and “Back to Druridge Bay”).

Some diatoms associated with a puddle close to the M11 in Cambridgeshire: A: Entomoneis paludosa var. salinarum; B: Surirella brebissonii; C: Tryblionella hungarica; D: Nitzschia sigma; E: Nitzschia vitrea; F: Cylindrotheca closterium; G: C. gracilis.  From Belcher and Swale (1993).

I do occasionally find diatoms from marine habitats in rivers, and often suspect road salt to be the culprit.  One of the most extreme cases I encountered was a sample from the Ingrebourne, a small stream close to my childhood home where Bacillaria paxillifer constituted a third of all the diatoms present.  Bacillaria paxillifer is an intriguing diatom (see “The paradox that is Bacillaria” and links) but one that is very definitely a species that prefers saline rather than fresh water.  The Ingrebourne passes under the M25 motorway within about a kilometre of its source and crosses the busy A12 trunk road just upstream of the sampling location, so periodic pulses of salt are a possibility.

The ephemeral nature of these events, however, make them hard to prove and we are left with scattered notes such as this one in a small natural history journal.   These journals are, in many cases, struggling to survive in the modern age and I guess blogs such as this are taking over from them as records of botanical observations that are not structured in a way that makes publication in a mainstream scientific journal a possibility.  Hilary Belcher and Erica Swale made a number of substantial contributions to algal research over the course of their careers, but they were also consummate observers and recorders of their local environment – the wellspring from which an understanding of the natural world ultimately flows.

I am thankful to Hilary in one other way: she and her partner Erica Swale wrote a small (47 page) booklet with clear line drawings of the most common freshwater algae that was a required purchase for all undergraduates (and demonstrators) attending Brian Whitton’s algae practicals at Durham and it was through this book that I started to learn how to identify algae.  There are, I notice, just 17 genera of diatoms illustrated in this book but there was enough here to start putting names onto the shapes that floated – or flitted – through my field of view as I struggled to learn the rudiments of the craft.

Left: Hilary Belcher on a sampling trip to the Thames in the early 1990s (photo: Alison Love) and, right: the cover of her introductory guide to freshwater algae, co-authored with Erica Swale.

Reference

Belcher, H. & Swale, E. (1993).  Some diatoms of a small saline habitat near Cambridge.  Nature Cambridgeshire 35: 75-77.

A full appreciation of the life and work of Hilary Belcher, compiled by Jenny Bryant, will appear in the next edition of The Phycologist.

The stresses of summertime …

One reaches a stage in an ecological career when your “niche” becomes the office not the field and you are expected to focus your hard-earned experience on data that others have collected.  That means that I spend more time than I wish – even in the summer – staring at computer screens and writing reports – and far too little time engaging directly with nature.   Today’s post is the result of a Saturday’s excursion around some of the more enigmatic parts of the Yorkshire Dales National Park (the enigma being, basically, that we spent most of our time in Cumbria, not Yorkshire).

The photograph above shows a steam locomotive hauling a train along the Settle to Carlisle railway as it makes its way through Mallerstang, the upper part of the Eden Valley.   It is a beautiful little valley, hidden away from the main tourist drags and the sight of a steam train imparted a sense that we were somehow detached, albeit briefly, from the modern world.   The river channel itself lies amidst the ribbon of woodland in the valley bottom.

The River Eden in Mallerstang (SD 778 985) with (right) a large pebble with a Cyanobacterial film.

Curious to see what kind of life thrives in such a heavily shaded stream, I hopped over a fence, pushed through some bankside vegetation, crouched down and lent out as far as possible to grab a few of the stones from the streambed.   As I would have expected in a stream in such a location, the slippery film on the stone surface was thin (this is the time of year when the algae and other microbes can barely grow fast enough to keep up with the voracious appetites of the invertebrates that inhabit the crevices among the rocks) but, when I held it up to the light, there was a distinct greenish tinge that piqued my curiosity.

Under the microscope, this green tinge revealed itself to be due to numerous filaments of a thin, non-heterocystous cyanobacterium (blue-green alga), similar to that which I see in the River Ehen (see “’Signal’ or ‘noise’?”).  There, Phormidium autumnale forms tough leathery mats whereas here there was no obvious arrangement of the filaments.   In fact, the filaments seemed to be randomly organised within a mass of organic matter that made photography difficult and the photograph below is of one that had glided into a clear space on the coverslip.   I was surprised that there were relatively few diatoms present but, amidst the clumps of cyanobacteria and organic matter, I could see cells of Gomphonema pumilum, though it was very definitely sub-dominant to the Phormidium.  That was not very easy to photograph either, and my images have been built-up using Helicon Focus stacking software.

Some of the algae living on stones in the upper River Eden, August 2017: a. Phormidium cf autumnale; b. and c.: Gomphonema cf pumilum.  Scale bar: 10 micrometres (= 100th of a centimetre). 

I have seen other streams where non-heterocystous cyanobacteria thrive during the summer months and suspect that their unpalatability relative to other algae may play a part in this.  This is partially induced by the proximity of grazers – a recent study suggested that filaments of Phormidium did not need to come into contact with the grazer itself, only to detect chemicals associated with the grazer in the ambient water.  This, in turn, can promote production of a tougher sheath, making the filaments less palatable.   I’m always a little surprised that aquatic invertebrates find diatoms, with their silica cell walls, palatable, but I see enough midge larvae greedily hoovering-up diatoms to recognise that they know something that I do not.

My brief visit to the upper River Eden reminds me that summer can be a tough time for stream algae.   Not only is this the time that the invertebrate larvae are scouring rock surfaces for algae to serve as the fuel that will catapult them into their brief adult phases, but also the trees are in full leaf, limiting the amount of energy that the algae can capture in order to power their own growth.   Not surprising, then, that so many algae – diatoms and other groups alike – are more prolific in the winter, when the invertebrates are not so active and there is less shade from marginal trees (see “Not so bleak midwinter?” and “A winter wonderland in the River Ehen”).   I’ll probably be sitting indoors staring at spreadsheets and writing reports this winter too, but I’ll still be looking for excuses to get out and explore nature’s hidden diversity.

Pendragon Castle, guarding the entrance to Mallerstang in the upper Eden Valley. 

Reference

Fiałkowska, E.  & Pajdak-Stós, A. (2014).  Chemical and mechanical signals inducing Phormidium (Cyanobacteria) defence against their grazers.   FEMS Microbiology Ecology 89: 659-669.

Freshwater Benthic Diatoms of Central Europe

I mentioned last year that I was working on an English translation of Diatomeen im Süßwasser-Benthos … (see “Tales of Hofmann …”) and I am pleased to say that it has just been published by Koeltz Books.   The original German edition was written by Gabi Hofmann, Horst Lange-Bertalot and Marcus Werum and included over 700  of the most commonly-encountered benthic diatoms.   The new edition has added Marco Cantonati as an additional author and myself as an editor and has also been expanded so that there are now over 800 species represented.  Marco also undertook the primary task of translating the German into English after which I stepped into to give the text a final polish.

We’ve also taken the opportunity to update the taxonomy.  One frustration for many was the conservative approach that the first edition took to Fragilaria and relatives.  There has been a vigorous debate about this group for the last thirty years, with unanimity on the limits of the various genera still not achieved to everyone’s satisfaction.  There are, however, few who would regard lumping all into Fragilaria to be an acceptable solution.  The new edition unpicks the Fragilaria mega-genus in greater detail than in the first, adding Ctenophora, Pseudostaurosira, Staurosira, Staurosirella and Ulnaria to the list of genera.   Similarly, Tryblionella has now been split off from Nitzschia. Several other new genera also make their debuts in this edition (including Gilwiczia, Humidophila, Khursevichia, Paraplaconeis and Prestauroneis) whilst Eolimna has disappeared, the extant species subsumed into Sellaphora.   Finally, some former Diatoma species are now found in Odontidium (see “A tale of two diatoms …”).    Fragilaria pectinalis (see “And another one …”) is another species that has been included in this volume.

We have also put in some time improving the keys.   The original edition had a worrying tendency to include ecological information in the couplets, which means that any inferences drawn from the diatom assemblage about the habitat is compromised as the name itself depends partly upon that habitat (see “Identification by association?”).  I have tried to remove such circularity from the identification process in this version.

I’m a big believer in all analysts who work within a program using the same identification literature (ideally we should be using the same identification literature as was used by the developers of the metrics that are being used).  This brings a measure of consistency to the outputs, and also provides an indication of the level of detail that is required, which can limit the amount of time spent tracking down the correct name for a few valves of a rare diatom.   The original version of this book served that purpose well, I thought, and I hope that the new edition will continue that trend.

If 158 euros for 2.7 kg of dense scientific prose is not your thing, my cousin Pippa Kelly has an alternative offering that I can recommend.  Her first novel, Invisible Ink, differs from Freshwater Benthic Diatoms in just three respects:

  1. it is cheaper (£8.99 for the paperback, £3.99 for the e-book);
  2. it is lighter (344 grams); and,
  3. it is a book you might actually want to read from cover to cover.

Tough choice.

As if through a glass darkly …

Life used to be so easy: I stared down my microscope, named the diatoms I could see, counted them and, from these data, made an evaluation of the quality of the ecosystem that I was studying.   Along with the majority of my fellow diatomists, I conveniently ignored the fact that I was looking at dead cell walls rather than living organisms.   My work on molecular barcodes as an alternative to traditional microscopy has been revelatory as I try to reconcile these two types of data.   At one level, what I see down the microscope is a benchmark for what I should expect to see in my barcode output.  Yet, at the same time, the differences between the two types of data show up the limitations of traditional data – and the assumptions that underpin the ways that we work.

Take a look at the plate below which shows two of the most common diatoms in UK rivers: Ulnaria ulna is one of the largest that I encounter regularly whilst Achnanthidium minutissimum is often one of the most abundant in my samples, particularly when the level of human pressure is relatively low.  When we analyse samples with the light microscope, we record individuals, so both of these score “1” in my data book despite the fact that U. ulna is about 100x larger (by volume) than A. minutissimum.

Specimens of Ulnaria ulna (top) and Achnanthidium minutissimum (bottom).  Both are from cultures used for obtaining sequences for the reference library for our molecular barcoding project.   Scale bar: 10 µm.   Photographs: Shinya Sato, Royal Botanic Gardens, Edinburgh.

When we analyse a sample using Next Generation Sequencing (NGS), we count not cell walls but copies of the rbcL gene, which provides the blueprint for Rubisco, a key photosynthetic enzyme.   As I write, there is no clear understanding of how the number of rbcL copies relates to the number of individuals.  We know that each chloroplast within a cell will have at least one copy of this gene, and usually several. There is also some evidence that larger chloroplasts have more copies of the gene than smaller ones and there is also likely to be a measure of environmental control.  The key message that I try to get across in my talks is that NGS data are different to the data we are used to gathering using microscopy.  These differences do not mean that it is wrong, just that we need to leave some of our preconceptions before starting to interpret this new type of data.

However, we could also argue that counting the number of copies of the gene for an important photosynthesis enzyme should be giving us a better insight into the contribution of a species to primary productivity than counting the number of cell walls.  In other words (whisper this …), rbcL might not just be different, it might be better, especially if our purpose is to understand the contribution the various species in the biofilm make to primary productivity in stream ecosystem.  At the moment there are plenty of problems with the NGS-based method, not least the fact that we often cannot assign half the copies of the rbcL gene in a sample to a species, but the situation is improving all the time …

Some recent work pushes this a little further.   Jodi Young and colleagues at Princeton University have demonstrated large variation in the kinetics of Rubisco in diatoms, and in their carbon-concentrating mechanisms (see “Concentrating on carbon …” for more about these).  Although their work is focussed on marine phytoplankton, the variation within Rubisco and carbonic anhydrases could go some way to explaining the sensitivity of diatoms to inorganic carbon (see “Ecology in the Hard Rock Café …”).   In other words, rbcL is not an irrelevant DNA sequence, as the term “barcode” may imply (in contrast to barcodes based on the ITS region, for example), it is deeply implicated in the reasons why a species lives in particular place.

And yet, and yet, and yet …  The same could be argued for morphology, up to a point at least.   The shape of a Gomphonema or a Navicula also helps us to understand the organism’s relationship with its environment.   The problem is that modern taxonomists tend to focus on a much finer level of detail – on the arrangement and structure of the various pores on the silica frustule, for example – and offer few insights into what these minute differences mean in terms of the ecophysiology of the organisms.  Even at the whole-cell scale, information on habit, which is linked to form (Gomphonema tending to live on stalks or short mucilage pads secreted from their foot poles for at least part of their life-cycle, for example) is rarely incorporated into assessment systems.   The move from using light microscopy to using NGS, in other words, means replacing an imperfect system with which we are familiar with one that we are still learning to understand.  Both offer unique information and the gains from using one approach rather than the other, will be offset by losses of insight.

That leaves us with two big challenges over the couple of years, as UK diatom-based assessments move from light microscopy to NGS.  The first is to work harder to understand what NGS outputs are actually telling us about the environment over and above the minimalist ecological status indices that spew out of our “black box” computer programs.   The second is to maintain an understanding of the properties of whole organisms and how these interact with one another and with their environments.   I guess I should add a third challenge to this pair: persuading middle managers who have at best a sketchy understanding of diatoms and phytobenthos and already-stretched budgets that any of this matters …

References

Badger, M.R. & Price, G.D. (2003).  The role of carbonic anhydrase in photosynthesis.  Annual Review of Plant Biology 45: 369-392.

Young, J.N. & Hopkinson, B.M.M. (2017).  The potential for co-evolution of CO2-concentrating mechanisms and Rubisco in diatoms.  Journal of Experimental Botany doi: 10.1093/jxb/erx130.

Young, J.N., Heureux, A.M.C., Sharwood, R.E., Rickaby, R.E.M., Morel, F.M.M. & Whitney, S.M. (2016).  Large variations in the Rubisco kinetics of diatoms reveals diversity among their carbon-concentrating mechanisms.  Journal of Experimental Botany 67: 3445-3456.

Off grid, in tune …

A weekend camping at the Latitude Festival barely ranks as hardship on any meaningful scale, but it does provide a brief opportunity to reflect on what, for 361 days of the year, I take wholly for granted.  Water is one of the leitmotifs of this blog, creating the habitats that the creatures I write about inhabit.   Yet I barely pause for thought when turning on taps or watching used water drain away whilst I am at home.   Here, I am off-grid: if I want water I have to walk to a standpipe and fill a container; if I want to wash in hot water, I have to light my sturdy old Trangia to heat-up a saucepan; when I use the toilets, I have to walk 100 metres and hope that the previous occupant left the cubicle in a usable state.

Our sojourn under the Suffolk sun, in other words, is brief jolt into the extent of our disconnection from nature’s cycles.   One immediate consequence of having to plan ahead and put in some effort (tiny, compared to that required by a large part of the developing world) is that the quantity of water that we actually use drops precipitously.   Scale that up from the individual to a population, and I wonder how much of the UK’s water infrastructure would be unnecessary if everyone had to think as hard about water usage as Latitude’s campers?

We are a little closer to nature, a little less inclined to think of ourselves as separate from the wider whole, a little humbler …

To realise:
That we live in nature
But can never possess it;
We can guide and serve
But never control
This is the highest wisdom
Tao 51

Highlights of Latitude 2017?  Fleet Foxes’ first UK show since 2011 was worth the price of the ticket alone.  78-year old Mavis Staples on Sunday afternoon was magical.  Ventriloquist Nina Conti left me crying with laughter.  The desert blues of Tinariwen was memorable and, amongst the newcomers, I’ll definitely be watching out for Julia Jacklin in the future.

Tinariwen on the Obelisk Stage at Latitude 2017.

Damp days in search of desmids …

Seatoller, in Borrowdale, is the wettest place in England, so we should not have been surprised by the persistent drizzle that accompanied us as we set off hunting for desmids last week.  The combination of Borrowdale’s hard volcanic rocks and a damp climate combine to create ideal habitats for bog-loving desmids and I had intelligence that Dock Tarn, on the fells above Borrowdale, was a hot spot of desmid diversity.   Getting there, however, was no easy task.  Though just a couple of kilometres from Stonethwaite on the map, there were an awful lot of contour lines awfully close together between the beginning and end of our walk.   The footpath zig-zagged through ancient woodland clinging to a steep hillside until we emerged onto the moorland above.  We then made our way across a plateau covered with heather moorland until we saw the tarn stretching away into the mist in front of us.

You know you are in good desmid habitat when there is water percolating into your body from both ends: rain dripping down from the hood of your cagoule and dampness seeping in through your shoes.  They are organisms that love marshy, boggy conditions, especially in areas where the water is as soft as it is here.   The alternative to damp feet would be to either climb up from Borrowdale in Wellingtons or waders or carry them up that steep hillside in a rucksack.   However, I suspect that the mud at the bottom of the tarn was too soft and deep for Wellington boots and lugging waders up that hillside would have been hard work so damp feet was the price I had to pay.   I leaned out as far as I could from the shore to grab some of the sedge stems which had a visible coating of attached algae, and also squeezed the peaty water from a few handfuls of Sphagnum that I pulled from a boggy pool.  That would have to do on this particular morning as the rain was now soaking through my trousers and, in any case, there were places I needed to be later that morning.   I shoved the bottles containing my samples into my rucksack and followed the path back down the hillside.

Epiphytic algae growing around a sedge stem in the outflow of Dock Tarn, Cumbria, July 2017.   The width of the stem plus epiphytes is about half a centimetre.

Dock Tarn is one of a number of sites identified as an “Important Plant Area” (IPA) on the basis of the rich desmid flora, largely due to work over the years by David Williamson.   It qualifies as an IPA on four criteria: the presence of threatened species, high diversity, a long history of study and because it represents a “threatened habitat”.   David Williamson has recorded over 50 species from this location, 13 of which are candidates for a “potential Red Data List”.   A few of these are illustrated in the figures below.   One of the species in the first image, Haplotaenium minutum, belongs to a genus only recently separated from Pleurotaenium, which looks very similar to the untrained eye (the difference lies in the structure of the ridges on the chloroplast).  Looking at these long cylindrical cells serves to emphasise just how much dexterity Chris Carter needed to produce his Hilda Canter-Lund prize winning image.  Images in the second plate include two more species of the genus Xanthidium, which we met in “Desmids on the defensive …”.

Dock tarn desmids: a. Netrium digitus var. latum; b. Tetmemorus brebissonii; c. Haplotaenium minutum.  Scale bar: 25 micrometres ( = 1/40th of a millimetre). 

The desmids in the lower plate, in particular, show one of their key characteristics very clearly: their cells are divided into two distinct lobes (“semicells”) joined by an isthmus (the word desmid comes from the Greek desmos, meaning “bond”).  The image of Staurastrum manfeldtii var. productum also shows a number of bacteria growing on the cell: these are probably growing within the mucilage that desmids secrete around themselves whilst there are distinct pyrenoids in the two Xanthidium species.  Their predilection for soft water means that they need the carbon-concentrating mechanisms that these contain if they are to thrive.   Not all desmids live in water as soft as this, and some are able to use inorganic bicarbonate to fuel their photosynthetic engine, but there will be little or no bicarbonatae in a habitat such as Dock Tarn.   I wrote about these carbon concentrating mechanisms in algae from Ennerdale Water (see “Concentrating on carbon …”) and the two filamentous algae that featured in that post, Mougeotia and Spirogyra, both belong to the same class within the green algae as the desmids (Conjugatophyceae or Zygnemtetophyceae).

There will be more about desmids on this blog over the next few months in preparation for a the weekend of 15-17 September when I am organising a joint meeting of the British Phycological Society and Quekett Microscopical Club in Windermere.  We’ll be visiting some other Lake District tarns known to be rich in desmids during this weekend and have Dave Johns and Allan Pentecost on hand, amongst others, to offer expert advice on what we find.  There are still a few places left, so hurry up to book your place.  I haven’t done a great job of selling the Cumbrian climate in this post but we have the use of the Freshwater Biological Association facilities, including a laboratory and the library, so no one need get damper than they want.   See you there…

More desmids from Dock Tarn: d. Euastrum cuneatum; e. Xanthidium cristatum var. uncinatum; f. Xanthidium antilopaeum; g. Staurastrum manfeldtii var. productum.   Scale bar: 25 micrometres
( = 1/40th of a millimetre). 

References

Coesel, P.F.M. (1994). On the ecological significance of a cellular mucilaginous envelope in planktic desmids. Algological Studies 73: 65-74.

Kiemle, S.N., Domozych, D.S. & Gretz, M.R. (2007). The extracellular polymeric substances of desmids (Conjugatophyceae, Streptophyta): chemistry, structural analyses and implications in wetland biofilms. Phycologia 46: 617-627.

Spijkerman, E., Maberly, S.C. & Coesel, P.F.M. (2005).  Carbon acquisition mechanisms by planktonicdesmids and their link to ecological distribution. Canadian Journal of Botany 83: 850–858.